STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRP4LDL receptor related protein 4. (1837 aa)    
Predicted Functional Partners:
AGRN
Agrin.
    
 0.877
DKK1
Dickkopf WNT signaling pathway inhibitor 1.
    
 0.835
LRPAP1
LDL receptor related protein associated protein 1.
    
 0.830
ENSCPUP00000002153
annotation not available
    
 0.822
LDLRAP1
Low density lipoprotein receptor adaptor protein 1.
    
 0.788
DAB2
DAB adaptor protein 2.
    
 0.783
ANKRA2
Ankyrin repeat family A member 2.
    
 0.744
MET
MET proto-oncogene, receptor tyrosine kinase.
    
  0.743
MST1R
Macrophage stimulating 1 receptor.
    
  0.743
RELN
Reelin.
    
 0.743
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.