STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDIL3EGF like repeats and discoidin domains 3. (475 aa)    
Predicted Functional Partners:
PROS1
Protein S.
   
 0.787
HEPHL1
Hephaestin like 1.
 
 
    0.772
HEPH
Hephaestin.
 
 
    0.764
CP
Ceruloplasmin.
 
 
    0.706
SLC40A1
Solute carrier family 40 member 1.
    
 0.685
LMAN1
Lectin, mannose binding 1.
    
 0.668
MCFD2
Multiple coagulation factor deficiency 2.
     
 0.660
FECH
Ferrochelatase.
   
 
 0.642
ATP7A
ATPase copper transporting alpha.
  
 
 0.628
ENSCPUP00000018988
annotation not available
  
 
 0.628
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.