STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUMO3Small ubiquitin-related modifier 3. (154 aa)    
Predicted Functional Partners:
RANBP2
E3 SUMO-protein ligase RanBP2-like.
   
 0.994
UBE2I
Ubiquitin conjugating enzyme E2 I.
   
 0.986
SENP1
SUMO specific peptidase 1.
    
 0.980
PCNA
Proliferating cell nuclear antigen.
   
 0.966
SAE1
SUMO1 activating enzyme subunit 1.
   
 0.965
UBA2
Ubiquitin like modifier activating enzyme 2.
   
 0.958
KCTD2
Potassium channel tetramerization domain containing 2.
   
 0.944
RANGAP1
Ran GTPase activating protein 1.
    
 0.943
SMC5
Structural maintenance of chromosomes 5.
   
 0.907
SENP5
SUMO specific peptidase 5.
   
 0.903
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.