STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IGF2RInsulin like growth factor 2 receptor. (2435 aa)    
Predicted Functional Partners:
SORL1
Sortilin related receptor 1.
    
 0.978
GAK
Cyclin G associated kinase.
   
 0.977
IGF2
Insulin like growth factor 2.
    
 
 0.975
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
   
 0.972
GGA3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3.
    
 
 0.964
M6PR
Mannose-6-phosphate receptor, cation dependent.
     
 0.918
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
 
 0.836
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
    
 
 0.836
SNX2
Sorting nexin 2.
    
 0.774
SNX1
Sorting nexin 1.
    
 0.759
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.