STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDKMidkine. (176 aa)    
Predicted Functional Partners:
PTPRZ1
Protein tyrosine phosphatase receptor type Z1.
    
 0.855
LTK
Leukocyte receptor tyrosine kinase.
    
 0.781
ALK
ALK receptor tyrosine kinase.
    
 0.781
STAT3
Signal transducer and activator of transcription 3.
     
 0.720
PTN
Pleiotrophin.
    
0.717
ROS1
ROS proto-oncogene 1, receptor tyrosine kinase.
    
 0.715
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.713
MST1R
Macrophage stimulating 1 receptor.
    
 0.703
PIK3CA
Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha.
     
 0.702
BRAF
B-Raf proto-oncogene, serine/threonine kinase.
    
 0.685
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.