STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACAT2acetyl-CoA acetyltransferase 2. (394 aa)    
Predicted Functional Partners:
ECI2
enoyl-CoA delta isomerase 2.
  
 0.987
HMGCS1
3-hydroxy-3-methylglutaryl-CoA synthase 1.
  
 0.986
HADH
hydroxyacyl-CoA dehydrogenase.
 
 0.984
HMGCS2
3-hydroxy-3-methylglutaryl-CoA synthase 2.
  
 0.979
CRYL1
Crystallin lambda 1.
  
 0.967
SCP2
Sterol carrier protein 2.
  
 0.963
HADHA
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha.
 
 0.947
ENSCPUP00000017147
annotation not available
  
 0.943
HSDL2
Hydroxysteroid dehydrogenase like 2.
  
 0.940
ACOX1
acyl-CoA oxidase 1.
  
 0.921
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.