STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IPO7Importin 7. (1037 aa)    
Predicted Functional Partners:
RANBP2
E3 SUMO-protein ligase RanBP2-like.
   
 0.983
EXOSC10
Exosome component 10.
   
 0.937
TTC37
Tetratricopeptide repeat domain 37.
   
 0.934
EXOSC9
Exosome component 9.
   
 0.924
EXOSC2
Exosome component 2.
   
 0.923
EXOSC1
Exosome component 1.
   
 0.921
ZFC3H1
Zinc finger C3H1-type containing.
    
 0.920
EXOSC7
Exosome component 7.
   
 0.919
EXOSC8
Exosome component 8.
   
 0.916
EXOSC3
Exosome component 3.
   
 0.912
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.