STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106885813Cysteine-rich venom protein TEL1-like. (247 aa)    
Predicted Functional Partners:
GART
annotation not available
    
  0.858
LOC106885656
Trifunctional purine biosynthetic protein adenosine-3-like.
    
  0.858
PPAT
Phosphoribosyl pyrophosphate amidotransferase.
  
 
  0.604
NANS
N-acetylneuraminate synthase.
     
 0.533
NANP
N-acetylneuraminic acid phosphatase.
     
 0.521
CMAS
Cytidine monophosphate N-acetylneuraminic acid synthetase.
     
 0.518
L2HGDH
L-2-hydroxyglutarate dehydrogenase.
    
  0.446
CD9
CD9 molecule.
   
  
 0.441
NDUFV2
NADH:ubiquinone oxidoreductase core subunit V2.
    
  0.435
FH
Fumarate hydratase.
    
  0.434
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.