STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAAP1Caspase activity and apoptosis inhibitor 1. (302 aa)    
Predicted Functional Partners:
PLAA
Phospholipase A2 activating protein.
 
 
  
 0.729
AKAP17A
A-kinase anchoring protein 17A.
    
   0.531
GREB1L
GREB1 like retinoic acid receptor coactivator.
      
 0.499
ZSWIM8
Zinc finger SWIM-type containing 8.
      
 0.461
SNX13
Sorting nexin 13.
      
 0.444
BFAR
Bifunctional apoptosis regulator.
      
 0.439
TRIP11
Thyroid hormone receptor interactor 11.
      
 0.408
MIER1
MIER1 transcriptional regulator.
      
 0.400
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.