STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPRKBTP53RK binding protein. (175 aa)    
Predicted Functional Partners:
TP53RK
TP53 regulating kinase.
   
 0.999
OSGEPL1
O-sialoglycoprotein endopeptidase like 1.
    
 0.998
NUP43
Nucleoporin 43.
    
   0.655
GNL2
G protein nucleolar 2.
      
 0.586
MRPS18C
Mitochondrial ribosomal protein S18C.
   
    0.530
LOC106896178
Uncharacterized LOC106896178.
      
 0.449
YRDC
yrdC N6-threonylcarbamoyltransferase domain containing.
      
 0.449
NET1
Neuroepithelial cell transforming 1.
      
 0.438
FANCM
FA complementation group M.
      
 0.438
GTSE1
G2 and S-phase expressed 1.
 
    
 0.436
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.