STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFCAB10EF-hand calcium-binding domain-containing protein 10-like. (130 aa)    
Predicted Functional Partners:
BAG3
BCL2 associated athanogene 3.
    
 0.851
HSP90AB1
Heat shock protein 90 alpha family class B member 1.
    
 0.613
HSP90AA1
Heat shock protein 90 alpha family class A member 1.
    
 0.613
TSC1
TSC complex subunit 1.
    
 0.613
TRAP1
TNF receptor associated protein 1.
    
 0.613
HSP90B1
Heat shock protein 90 beta family member 1.
    
 0.597
ENSCPUP00000022178
annotation not available
    
 0.597
HSPA9
Heat shock protein family A (Hsp70) member 9.
    
 0.581
HSPA5
Heat shock protein family A (Hsp70) member 5.
    
 0.580
HYOU1
Hypoxia up-regulated 1.
    
 0.566
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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