STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRY2Cryptochrome circadian regulator 2. (589 aa)    
Predicted Functional Partners:
ARNTL
Aryl hydrocarbon receptor nuclear translocator like.
   
 0.996
FBXL3
F-box and leucine rich repeat protein 3.
    
 0.996
PER2
Period circadian regulator 2.
   
 0.974
PER3
Period circadian regulator 3.
   
 0.972
CLOCK
Clock circadian regulator.
    
 0.971
NPAS2
Neuronal PAS domain protein 2.
    
 0.962
LOC106889676
Cryptochrome DASH-like.
  
 
0.946
LOC106890443
Cryptochrome-1-like.
  
 
0.939
CRY1
Cryptochrome circadian regulator 1.
  
 
0.938
TIMELESS
Timeless circadian regulator.
    
 0.884
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.