STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000020391annotation not available (385 aa)    
Predicted Functional Partners:
RPS27A
Ribosomal protein S27a.
    
  0.553
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.544
OASL
2'-5'-oligoadenylate synthase 1-like.
    
 0.502
LOC106900028
polyubiquitin-B.
    
 0.502
LOC106895106
Inducible T-cell costimulator-like.
    
  0.490
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
    
  0.489
UBE2L5
Ubiquitin conjugating enzyme E2 L3.
    
  0.485
KDM2A
Lysine demethylase 2A.
    
  0.482
KDM2B
Lysine demethylase 2B.
    
  0.482
GAS7
Growth arrest specific 7.
    
  0.471
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.