STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000020610annotation not available (211 aa)    
Predicted Functional Partners:
ADGRL2
Adhesion G protein-coupled receptor L2.
   
 
 0.995
ADGRL3
Adhesion G protein-coupled receptor L3.
   
 
 0.995
EGFLAM
EGF like, fibronectin type III and laminin G domains.
    
 0.870
PDK1
Pyruvate dehydrogenase kinase 1.
    
 0.854
PDK3
Pyruvate dehydrogenase kinase 3.
    
 0.854
PDK4
Pyruvate dehydrogenase kinase 4.
    
 0.854
ENSCPUP00000013492
annotation not available
    
 0.854
PDK2
Pyruvate dehydrogenase kinase 2.
    
 0.854
MET
MET proto-oncogene, receptor tyrosine kinase.
   
 
 0.827
MST1R
Macrophage stimulating 1 receptor.
   
 
 0.827
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.