STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNTN2Contactin 2. (1036 aa)    
Predicted Functional Partners:
NRCAM
Neuronal cell adhesion molecule.
    
0.917
CHL1
Cell adhesion molecule L1 like.
    
0.917
CNTNAP2
Contactin associated protein like 2.
   
 0.906
NFASC
Neurofascin.
   
0.887
CNTNAP5
Contactin associated protein like 5.
   
 0.874
APP
Amyloid beta precursor protein.
   
 
 0.804
CNTNAP4
Contactin associated protein like 4.
   
 0.773
CNTNAP1
Contactin associated protein 1.
   
 0.773
GYPC
Glycophorin C (Gerbich blood group).
   
 0.773
NRP1
Neuropilin 1.
    
 0.751
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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