STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000021129annotation not available (257 aa)    
Predicted Functional Partners:
ENSCPUP00000021130
annotation not available
 
     0.949
ENSCPUP00000021131
annotation not available
 
     0.947
ENSCPUP00000021121
annotation not available
 
     0.942
ENSCPUP00000021134
annotation not available
 
     0.926
SYNE3
Spectrin repeat containing nuclear envelope family member 3.
 
   
 0.918
SUN2
Sad1 and UNC84 domain containing 2.
    
 0.878
SUN1
Sad1 and UNC84 domain containing 1.
    
 0.866
ENSCPUP00000021017
annotation not available
 
  
  0.741
CLMN
Calmin.
 
   
  0.710
ENY2
ENY2 transcription and export complex 2 subunit.
    
 0.652
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.