STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IPCEF1Interaction protein for cytohesin exchange factors 1. (427 aa)    
Predicted Functional Partners:
CNKSR3
CNKSR family member 3.
 
  
 
 0.797
BRAF
B-Raf proto-oncogene, serine/threonine kinase.
    
 0.695
RAF1
Raf-1 proto-oncogene, serine/threonine kinase.
    
 0.695
KSR2
Kinase suppressor of ras 2.
    
 0.680
KSR1
Kinase suppressor of ras 1.
    
 0.680
CYTH4
Cytohesin 4.
    
 
 0.628
RALA
RAS like proto-oncogene A.
    
 0.607
SAMD12
Sterile alpha motif domain containing 12.
    
 0.607
RALB
RAS like proto-oncogene B.
    
 0.607
HRAS
HRas proto-oncogene, GTPase.
    
 0.593
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.