STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIAM2TIAM Rac1 associated GEF 2. (1726 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
    
 0.900
PARD3
Par-3 family cell polarity regulator.
    
 0.864
CD44
CD44 molecule (Indian blood group).
    
 0.860
MRAS
Muscle RAS oncogene homolog.
    
 0.851
RRAS2
RAS related 2.
    
 0.851
PRKCZ
Protein kinase C zeta.
    
 0.789
PRKCI
Protein kinase C iota.
    
 0.789
RAP1B
RAP1B, member of RAS oncogene family.
    
 0.785
RAP1A
RAP1A, member of RAS oncogene family.
    
 0.785
PARD3B
Par-3 family cell polarity regulator beta.
    
 0.778
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.