STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000021217annotation not available (718 aa)    
Predicted Functional Partners:
ENSCPUP00000000773
annotation not available
   
 
  0.841
PISD
Phosphatidylserine decarboxylase proenzyme.
     
 0.742
ENPP6
Ectonucleotide pyrophosphatase/phosphodiesterase 6.
   
 
  0.736
ALOX5
Arachidonate 5-lipoxygenase.
     
 0.734
PLCG2
Phospholipase C gamma 2.
     
 0.721
PLCG1
Phospholipase C gamma 1.
     
 0.721
LOC106902269
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1-like.
     
 0.721
CEPT1
Choline/ethanolamine phosphotransferase 1.
     
 0.720
LOC106890407
Cytochrome P450 3A9-like.
   
 
  0.718
MAPK1
Mitogen-activated protein kinase 1.
    
  0.703
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.