STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETFAElectron transfer flavoprotein subunit alpha. (384 aa)    
Predicted Functional Partners:
ENSCPUP00000001581
annotation not available
 
 0.999
ETFDH
Electron transfer flavoprotein dehydrogenase.
 
 0.999
ACADM
acyl-CoA dehydrogenase medium chain.
 
 0.996
SUCLG1
succinate-CoA ligase alpha subunit.
  
 
 0.969
ACAD8
acyl-CoA dehydrogenase family member 8.
 
 0.958
ENSCPUP00000022198
annotation not available
  
 0.955
ACAD9
acyl-CoA dehydrogenase family member 9.
 
 0.927
IVD
isovaleryl-CoA dehydrogenase.
 
 0.925
HADH
hydroxyacyl-CoA dehydrogenase.
  
 0.921
ACOX3
acyl-CoA oxidase 3, pristanoyl.
  
 0.918
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.