STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
INPP5EInositol polyphosphate-5-phosphatase E. (659 aa)    
Predicted Functional Partners:
SACM1L
SAC1 like phosphatidylinositide phosphatase.
 
  
 0.986
PDE6D
Phosphodiesterase 6D.
    
 0.961
ARL13B
ADP ribosylation factor like GTPase 13B.
     
 0.939
PIP5K1B
Phosphatidylinositol-4-phosphate 5-kinase type 1 beta.
     
 0.900
PIK3R2
Phosphoinositide-3-kinase regulatory subunit 2.
    
 0.870
SYNJ1
Synaptojanin 1.
    
0.855
SYNJ2
Synaptojanin 2.
    
0.855
PI4KB
Phosphatidylinositol 4-kinase beta.
     
 0.851
PIP4K2A
Phosphatidylinositol-5-phosphate 4-kinase type 2 alpha.
     
 0.850
LOC106902269
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1-like.
    
 0.850
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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