STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CARD9Caspase recruitment domain family member 9. (544 aa)    
Predicted Functional Partners:
BCL10
BCL10 immune signaling adaptor.
   
 0.989
MALT1
MALT1 paracaspase.
    
 0.972
CARD11
Caspase recruitment domain family member 11.
  
 
0.946
SYK
Spleen associated tyrosine kinase.
   
 
 0.933
LOC106899718
Mucosa-associated lymphoid tissue lymphoma translocation protein 1-like.
    
 0.921
CASP8
Caspase 8.
   
 0.895
ZAP70
Tyrosine-protein kinase ZAP-70.
   
 
 0.859
LOC106895250
Caspase-8-like.
   
 0.858
LOC106900776
Caspase-8-like.
   
 0.858
MAPK11
Mitogen-activated protein kinase 11.
   
 
 0.850
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.