STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000021853annotation not available (217 aa)    
Predicted Functional Partners:
MTHFR
Methylenetetrahydrofolate reductase.
  
 
 0.958
CTH
Cystathionine gamma-lyase.
  
 
 0.924
GART
annotation not available
  
 
 0.922
LOC106885656
Trifunctional purine biosynthetic protein adenosine-3-like.
  
 
 0.922
MARS1
methionyl-tRNA synthetase 1.
  
 
 0.901
ALDH7A1
Aldehyde dehydrogenase 7 family member A1.
  
 0.860
GLDC
Glycine decarboxylase.
  
 
 0.858
LOC106896396
L-threonine dehydratase catabolic TdcB-like.
  
 0.850
SDSL
Serine dehydratase like.
  
 0.850
AHCY
Adenosylhomocysteinase.
  
 
 0.849
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.