STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000021963annotation not available (140 aa)    
Predicted Functional Partners:
MAGI2
Membrane associated guanylate kinase, WW and PDZ domain containing 2.
 
      0.900
CTNNB1
Catenin beta 1.
    
 0.891
RAPGEF2
Rap guanine nucleotide exchange factor 2.
    
 0.861
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
 
  
 0.832
PTEN
Phosphatase and tensin homolog.
    
 0.802
LOC106902384
Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2-like.
    
 0.802
IGSF5
Immunoglobulin superfamily member 5.
    
 0.801
RAPGEF6
Rap guanine nucleotide exchange factor 6.
    
  0.794
MAGI1
Membrane associated guanylate kinase, WW and PDZ domain containing 1.
    
 
0.794
CDC42
Cell division cycle 42.
    
 0.759
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.