STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELOVL7ELOVL fatty acid elongase 7. (279 aa)    
Predicted Functional Partners:
HSD17B12
Hydroxysteroid 17-beta dehydrogenase 12.
   
 0.863
HACD3
3-hydroxyacyl-CoA dehydratase 3.
    
 0.851
ELOVL5
ELOVL fatty acid elongase 5.
  
 
 
0.841
ELOVL1
ELOVL fatty acid elongase 1.
  
  
 
0.840
OXSM
3-oxoacyl-ACP synthase, mitochondrial.
     
 0.792
ELOVL2
ELOVL fatty acid elongase 2.
  
 
 
0.789
ELOVL6
ELOVL fatty acid elongase 6.
     
0.763
HACD1
3-hydroxyacyl-CoA dehydratase 1.
    
 0.741
HACD2
3-hydroxyacyl-CoA dehydratase 2.
    
 0.741
ELOVL4
ELOVL fatty acid elongase 4.
  
 
0.696
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.