STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTSLCathepsin L. (338 aa)    
Predicted Functional Partners:
CD74
CD74 molecule.
   
 0.957
CTSB
Cathepsin B.
  
0.906
CTSD
Cathepsin D.
   
 0.901
CTSS
Cathepsin S.
  
 
0.901
CTSO
Cathepsin O.
  
0.888
CTSH
Cathepsin H.
  
 
0.884
LOC106900940
Cathepsin E-A-like.
   
 0.869
CTSK
Cathepsin K.
  
 
0.868
CTSE
Cathepsin E.
   
 0.861
CTSZ
Cathepsin Z.
  
0.854
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.