STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPS8L2EPS8 like 2. (605 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.876
ENSCPUP00000016887
annotation not available
    
 0.876
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 0.790
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
    
  0.788
GRIN2A
Glutamate ionotropic receptor NMDA type subunit 2A.
    
  0.788
GRIN1
Glutamate ionotropic receptor NMDA type subunit 1.
    
  0.783
GRIA3
Glutamate ionotropic receptor AMPA type subunit 3.
    
 0.775
GRIN2B
Glutamate ionotropic receptor NMDA type subunit 2B.
    
  0.773
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
   
  0.773
GRIN2C
Glutamate ionotropic receptor NMDA type subunit 2C.
    
  0.770
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.