STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDAN1Codanin 1. (1299 aa)    
Predicted Functional Partners:
ASF1A
Anti-silencing function 1A histone chaperone.
    
 
 0.820
AARS2
alanyl-tRNA synthetase 2, mitochondrial.
   
    0.673
PRDM15
PR/SET domain 15.
   
    0.673
C15orf41
Chromosome unknown open reading frame, human C15orf41.
    
 
 0.577
IPO5
Importin 5.
    
 
 0.479
WDFY3
WD repeat and FYVE domain containing 3.
      
 0.439
ENSCPUP00000025472
annotation not available
      
 0.436
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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