STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLCB2Phospholipase C beta 2. (1202 aa)    
Predicted Functional Partners:
ITPR2
Inositol 1,4,5-trisphosphate receptor type 2.
    
 0.876
ITPR3
Inositol 1,4,5-trisphosphate receptor type 3.
    
 0.876
ITPR1
Inositol 1,4,5-trisphosphate receptor type 1.
    
 0.876
DGKQ
Diacylglycerol kinase theta.
     
 0.869
ITPKA
Inositol-trisphosphate 3-kinase A.
     
 0.868
ITPKB
Inositol-trisphosphate 3-kinase B.
     
 0.867
CAMK2G
Calcium/calmodulin dependent protein kinase II gamma.
   
 0.861
GNAO1
G protein subunit alpha o1.
   
 0.861
INPP5A
Inositol polyphosphate-5-phosphatase A.
   
 
 0.860
PLCB4
Phospholipase C beta 4.
  
  
0.853
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.