STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SELENOPSelenoprotein P. (207 aa)    
Predicted Functional Partners:
DIO1
Iodothyronine deiodinase 1.
   
  
 0.463
MSRB1
Methionine sulfoxide reductase B1.
      
 0.454
SELENOK
Selenoprotein K.
      
 0.443
TXNRD2
Thioredoxin reductase 2.
      
 0.439
SELENOT
Selenoprotein T.
      
 0.439
SELENOO
Selenoprotein O.
      
 0.438
SELENOS
Selenoprotein S.
      
 0.435
SELENOF
Selenoprotein F.
      
 0.408
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.