STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOMM22Translocase of outer mitochondrial membrane 22. (86 aa)    
Predicted Functional Partners:
TOMM7
Translocase of outer mitochondrial membrane 7.
   
 0.999
TOMM40L
Translocase of outer mitochondrial membrane 40 like.
   
 0.997
ENSCPUP00000018749
annotation not available
    
 0.995
TOMM20
Translocase of outer mitochondrial membrane 20.
   
 0.994
TOMM5
Translocase of outer mitochondrial membrane 5.
   
 0.989
SAMM50
SAMM50 sorting and assembly machinery component.
   
 0.989
TOMM70
Translocase of outer mitochondrial membrane 70.
   
 0.986
MFN1
Mitofusin 1.
    
 0.947
MTX2
Metaxin 2.
    
 0.938
DNAJC11
DnaJ heat shock protein family (Hsp40) member C11.
    
  0.919
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.