STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOMER3Homer scaffold protein 3. (356 aa)    
Predicted Functional Partners:
HOMER1
Homer scaffold protein 1.
    
0.962
GRM1
Glutamate metabotropic receptor 1.
    
 0.915
GRM5
Glutamate metabotropic receptor 5.
    
 0.886
HOMER2
Homer scaffold protein 2.
    
 
0.859
SHANK3
SH3 and multiple ankyrin repeat domains 3.
    
 0.762
DLGAP1
DLG associated protein 1.
    
 0.638
BCL2L14
BCL2 like 14.
      
 0.609
GRM8
Glutamate metabotropic receptor 8.
    
 0.601
GRM4
Metabotropic glutamate receptor 4.
    
 0.601
GRM7
Glutamate metabotropic receptor 7.
    
 0.601
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.