STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM20CFAM20C golgi associated secretory pathway kinase. (452 aa)    
Predicted Functional Partners:
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
  
 
0.981
ENSCPUP00000022799
annotation not available
  
 
0.924
FAM20B
FAM20B glycosaminoglycan xylosylkinase.
  
 
0.878
SPP1
Secreted phosphoprotein 1.
    
 0.752
FGA
Fibrinogen alpha chain.
    
  0.743
PCSK9
Proprotein convertase subtilisin/kexin type 9.
    
 0.739
NUCB2
Nucleobindin 2.
    
 0.731
PENK
Proenkephalin.
    
 0.694
CHGB
Chromogranin B.
    
  0.680
PDIA6
Protein disulfide isomerase family A member 6.
    
  0.680
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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