STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRTC1CREB regulated transcription coactivator 1. (589 aa)    
Predicted Functional Partners:
CREB1
cAMP responsive element binding protein 1.
    
 0.887
ATF1
Activating transcription factor 1.
    
 0.772
SIK2
Salt inducible kinase 2.
    
 0.758
CREB3L3
cAMP responsive element binding protein 3 like 3.
     
 0.689
CREB3L1
cAMP responsive element binding protein 3 like 1.
     
 0.689
CREB3
cAMP responsive element binding protein 3.
     
 0.689
CREB3L2
cAMP responsive element binding protein 3 like 2.
     
 0.689
OGT
O-linked N-acetylglucosamine (GlcNAc) transferase.
     
 0.591
ENSCPUP00000011817
annotation not available
    
  0.550
SIK1
Salt inducible kinase 1.
     
 0.489
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.