STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHD3EH domain containing 3. (535 aa)    
Predicted Functional Partners:
RBSN
Rabenosyn, RAB effector.
    
 0.948
RAB11FIP2
RAB11 family interacting protein 2.
    
 0.864
WDFY4
WDFY family member 4.
     
 0.853
AP2M1
Adaptor related protein complex 2 subunit mu 1.
    
 0.806
RAB11FIP5
RAB11 family interacting protein 5.
     
 0.786
AP2A2
Adaptor related protein complex 2 subunit alpha 2.
    
  0.784
CLTCL1
Clathrin heavy chain 2-like.
    
 0.766
EIF3L
Eukaryotic translation initiation factor 3 subunit L.
    
 
 0.766
CLTC
Clathrin heavy chain.
    
 0.766
ENSCPUP00000006491
annotation not available
    
 0.754
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.