STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM83HProtein FAM83H-like. (1125 aa)    
Predicted Functional Partners:
VRK3
VRK serine/threonine kinase 3.
    
 
 0.688
TTBK2
Tau tubulin kinase 2.
    
 
 0.668
CSNK1A1
Casein kinase 1 alpha 1.
    
 
 0.664
VRK2
VRK serine/threonine kinase 2.
    
 
 0.626
LAMB3
Laminin subunit beta 3.
      
 0.609
VRK1
VRK serine/threonine kinase 1.
    
 
 0.552
COL17A1
Collagen type XVII alpha 1 chain.
      
 0.534
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
      
 0.528
DLX3
Distal-less homeobox 3.
      
 0.519
STIM1
Stromal interaction molecule 1.
      
 0.509
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.