STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MFSD5Major facilitator superfamily domain containing 5. (454 aa)    
Predicted Functional Partners:
MFSD11
Major facilitator superfamily domain containing 11.
      
 0.548
C12orf10
Chromosome unknown open reading frame, human C12orf10.
   
  
 0.529
MFSD13A
Major facilitator superfamily domain containing 13A.
      
 0.478
ABCF2
ATP binding cassette subfamily F member 2.
      
 0.459
C11orf49
Chromosome unknown open reading frame, human C11orf49.
      
 0.439
MFSD12
Major facilitator superfamily domain containing 12.
   
  
 0.427
SLC25A38
Solute carrier family 25 member 38.
      
 0.424
MFSD2B
Major facilitator superfamily domain containing 2B.
   
  
 0.418
MFSD9
Major facilitator superfamily domain containing 9.
      
 0.412
SVOP
SV2 related protein.
      
 0.408
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.