STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACKR3Atypical chemokine receptor 3. (364 aa)    
Predicted Functional Partners:
CXCL12
C-X-C motif chemokine ligand 12.
    
 0.987
CXCR4
C-X-C motif chemokine receptor 4.
    
0.967
ENSCPUP00000000773
annotation not available
    
  0.762
ARRB1
Arrestin beta 1.
    
 0.752
ARR3
Arrestin 3.
    
 0.752
ATP5F1A
ATP synthase F1 subunit alpha.
    
  0.696
ATP5PO
ATP synthase peripheral stalk subunit OSCP.
    
   0.690
SAG
S-antigen visual arrestin.
    
 0.687
ATP5F1B
ATP synthase F1 subunit beta.
    
  0.656
ENSCPUP00000027993
annotation not available
    
 0.650
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.