STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R13LProtein phosphatase 1 regulatory subunit 13 like. (946 aa)    
Predicted Functional Partners:
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
    
 0.855
IFNAR2
Interferon alpha and beta receptor subunit 2.
   
 0.841
PPP1CA
Protein phosphatase 1 catalytic subunit alpha.
    
 0.833
PPP1CC
Protein phosphatase 1 catalytic subunit gamma.
    
 0.833
IL10
Interleukin 10.
    
 0.831
IL22
Interleukin 22.
    
 0.827
IL10RA
Interleukin 10 receptor subunit alpha.
   
 0.819
IL22RA1
Interleukin 22 receptor subunit alpha 1.
    
 0.803
LOC106893761
Interferon lambda-3-like.
    
 0.759
TP63
Tumor protein p63.
    
 0.749
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.