STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000023468annotation not available (277 aa)    
Predicted Functional Partners:
HLA-DRA
H-2 class II histocompatibility antigen, A-Q alpha chain-like.
    
  0.968
CD3E
CD3e molecule.
   
 
  0.924
ENSCPUP00000022747
annotation not available
   
  0.894
ZAP70
Tyrosine-protein kinase ZAP-70.
   
  0.889
LOC106898545
Class II histocompatibility antigen, B-L beta chain-like.
    
  0.889
LOC106898546
Class II histocompatibility antigen, B-L beta chain-like.
    
  0.889
LOC106898555
Class II histocompatibility antigen, B-L beta chain-like.
    
  0.889
ENSCPUP00000000508
annotation not available
    
  0.883
CD3D
CD3d molecule.
   
  0.862
LOC106900085
HLA class II histocompatibility antigen, DM beta chain-like.
   
  0.860
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.