STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF704Zinc finger protein 704. (446 aa)    
Predicted Functional Partners:
UBE2V1
Ubiquitin-conjugating enzyme E2 variant 1.
     
 0.844
LOC106893757
BRCA1-associated RING domain protein 1-like.
    
 0.821
ENSCPUP00000025694
annotation not available
    
 0.821
ENSCPUP00000002614
annotation not available
    
 0.756
LOC106900355
Heme-binding protein 1-like.
    
 0.756
RAG2
Recombination activating 2.
   
 0.738
PLA2G4A
Phospholipase A2 group IVA.
     
 0.733
RPL21
Ribosomal protein L21.
   
   0.710
ENSCPUP00000011075
annotation not available
    
  0.692
BABAM1
BRISC and BRCA1 A complex member 1.
    
 0.679
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.