STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRB2Crumbs cell polarity complex component 2. (1434 aa)    
Predicted Functional Partners:
CRB1
Crumbs cell polarity complex component 1.
    
0.946
MAML1
Mastermind like transcriptional coactivator 1.
    
 0.879
MSL3
MSL complex subunit 3.
    
 0.874
NCSTN
Nicastrin.
    
 0.842
MSL2
MSL complex subunit 2.
    
 0.842
PSEN2
Presenilin 2.
    
 0.833
APH1A
Aph-1 homolog A, gamma-secretase subunit.
    
 0.794
PATJ
PATJ crumbs cell polarity complex component.
   
 0.788
CBR1
Carbonyl reductase [NADPH] 1-like.
    
 0.786
NUMB
NUMB endocytic adaptor protein.
    
 0.776
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.