STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RUNX3RUNX family transcription factor 3. (442 aa)    
Predicted Functional Partners:
MYSM1
Histone H2A deubiquitinase MYSM1.
    
  0.968
CBFB
Core-binding factor subunit beta.
    
 0.938
CEBPA
CCAAT enhancer binding protein alpha.
    
 0.822
FOS
Fos proto-oncogene, AP-1 transcription factor subunit.
    
 0.789
ETS2
ETS proto-oncogene 2, transcription factor.
   
 0.781
ETS1
Transforming protein p68/c-ets-1.
   
 0.781
CSF1R
Colony stimulating factor 1 receptor.
   
 0.779
CEBPB
CCAAT enhancer binding protein beta.
    
 0.776
SPI1
Spi-1 proto-oncogene.
   
 0.776
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
    
 0.767
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.