STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EXTL1Exostosin like glycosyltransferase 1. (792 aa)    
Predicted Functional Partners:
EXT2
Exostosin glycosyltransferase 2.
    
0.971
EXTL2
Exostosin like glycosyltransferase 2.
    
0.907
EXTL3
Exostosin like glycosyltransferase 3.
   
0.870
EXT1
Exostosin glycosyltransferase 1.
  
  
 
0.838
LOC106893004
Probable low-specificity L-threonine aldolase 2.
     
 0.797
PSAT1
Phosphoserine aminotransferase 1.
     
 0.786
LOC106896396
L-threonine dehydratase catabolic TdcB-like.
     
 0.706
SDSL
Serine dehydratase like.
     
 0.706
LOC106891680
L-threonine 3-dehydrogenase, mitochondrial.
     
 0.559
ENSCPUP00000006226
annotation not available
    
 0.549
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.