STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC9A1Solute carrier family 9 member A1. (724 aa)    
Predicted Functional Partners:
CHP1
Calcineurin like EF-hand protein 1.
    
 0.984
MSN
Moesin.
    
 0.938
EZR
Ezrin.
    
 0.938
RDX
Radixin.
    
 0.927
ATP1B2
ATPase Na+/K+ transporting subunit beta 2.
     
 0.920
ABCG5
ATP binding cassette subfamily G member 5.
     
 0.917
ABCG8
ATP binding cassette subfamily G member 8.
     
 0.913
TESC
Tescalcin.
    
 0.897
PPP3R1
Protein phosphatase 3 regulatory subunit B, alpha.
    
 0.894
ROCK1
Rho associated coiled-coil containing protein kinase 1.
   
 0.886
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.