STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDTC1WD and tetratricopeptide repeats 1. (691 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
    
 0.995
DDA1
DET1 and DDB1 associated 1.
    
 0.942
DCAF4
DDB1 and CUL4 associated factor 4.
     
 0.939
DCAF10
DDB1 and CUL4 associated factor 10.
     
 0.938
DCAF12
DDB1 and CUL4 associated factor 12.
     
 0.934
ENSCPUP00000018940
annotation not available
    
 0.931
DCAF6
DDB1 and CUL4 associated factor 6.
    
0.929
LOC106899938
DDB1- and CUL4-associated factor 8-like.
    
0.929
CRBN
Cereblon.
     
 0.927
DCAF1
DDB1 and CUL4 associated factor 1.
     
 0.925
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.