STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC124Coiled-coil domain containing 124. (221 aa)    
Predicted Functional Partners:
RPS5
Ribosomal protein S5.
   
 
 0.948
RPS15
Ribosomal protein S15.
   
   0.948
RPL23A
Ribosomal protein L23a.
   
   0.948
RPS19
Ribosomal protein S19.
   
 
 0.945
RPS2
40S ribosomal protein S2.
   
   0.945
RPS3
Ribosomal protein S3.
    
   0.944
RPS21
Ribosomal protein S21.
   
   0.938
RPL11
Ribosomal protein L11.
    
 
 0.938
RPSA
Ribosomal protein SA.
   
   0.937
RPS11
Ribosomal protein S11.
   
   0.937
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.