STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COMMD4COMM domain containing 4. (177 aa)    
Predicted Functional Partners:
UBXN7
UBX domain protein 7.
   
 
  0.965
COMMD2
COMM domain containing 2.
    
 0.948
COMMD9
COMM domain-containing protein 9-like.
   
 0.942
LOC106895666
COMM domain-containing protein 5-like.
   
 0.928
COMMD1
Copper metabolism domain containing 1.
    
 0.919
COMMD8
COMM domain containing 8.
    
 0.919
COMMD10
COMM domain containing 10.
    
 0.918
COMMD6
COMM domain containing 6.
    
 0.910
COMMD7
COMM domain containing 7.
    
 0.896
DNAJC10
DnaJ heat shock protein family (Hsp40) member C10.
   
 0.884
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.