STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCNL1Cyclin L1. (397 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.910
CDC73
Cell division cycle 73.
     
 0.557
CDK10
Cyclin dependent kinase 10.
    
 
 0.535
CDK11A
Cyclin dependent kinase 11A.
    
 
 0.531
ZNF276
Zinc finger protein 276.
   
  
 0.511
WDR61
WD repeat domain 61.
     
 0.479
DCAF1
DDB1 and CUL4 associated factor 1.
    
 
 0.464
GAK
Cyclin G associated kinase.
      
 0.451
CDK9
Cyclin dependent kinase 9.
     
 0.445
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
     
 0.442
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.