STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCC4ATP binding cassette subfamily C member 4. (1287 aa)    
Predicted Functional Partners:
AK9
Adenylate kinase 9.
  
  0.691
KATNAL2
Katanin catalytic subunit A1 like 2.
  
 0.658
SLC9A3R1
SLC9A3 regulator 1.
   
 0.608
SLC9A3R2
SLC9A3 regulator 2.
   
 0.608
USP10
Ubiquitin specific peptidase 10.
    
  0.588
KIRREL1
Kirre like nephrin family adhesion molecule 1.
   
 0.586
KIRREL3
Kirre like nephrin family adhesion molecule 3.
   
 0.586
GOPC
Golgi associated PDZ and coiled-coil motif containing.
   
 0.579
NME8
NME/NM23 family member 8.
  
 0.577
KCNJ11
Potassium inwardly rectifying channel subfamily J member 11.
 
 
 0.576
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.